Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949055.1_cds_XP_016490112.1_80571
CDS Infomation

[gene=LOC107809928] [db_xref=GeneID:107809928] [protein=uncharacterized protein LOC107809928] [protein_id=XP_016490112.1] [location=join(30039..31313,31404..31517,31978..32155,32242..32423,32572..32708,32777..32872,33004..33073,33158..33232,33305..33350,33443..33507)] [gbkey=CDS]
Sequence

ATGGAGGGAGCTTCAACATATAAAAGAACTCTACAACTGAAAATCTCGTCGAGTATGAGG
CAAAGGAGAAGTGGTTACGAGCCATCAGATACTGAGACAGACTGGACGTTGGACAGTCCA
CACCGTGAAGCAAATGCAAACAATGAAAAAGAAATACATCTTGAAGAACCTGAAAGCGAA
GAGCAAAATCTAGCATTGCAGAAAGCAAAGGACAATAATTTTTTGAATGTAAGCCGGAGG
ACTAATGTCCCCAGTCCTGCTCGAAGGAGAACTACTAAGTCTCCTTATAAGCCTCGTAGA
GATACCGATGATGATGTTCATTCTCCTGCAAAAGCTTTGCCAAGAAGTGTTAGCACATTT
GCACGCAGGCCTGATTTATATTCTCGTAGAAATGTTAGTTCTTTTCAAAAATCTGAGTAC
CATAGACATACATCTCCATATAAATATGAGGATGAATTTGCTGATTCAAATAGAAAGCAA
AACAATGTCCATAGTAGACTCGGTGAGAAATCAAATTATAATCGCAGGTATGCTTCTGCT
CCTAGACCTGACAGACAACATAGGTTTGATGCTTCTAAGGAGCGAAGGAAAGCAGATAAG
ACGCTGTCCCAATTGCCAAATAGGAGCTTGTCGCGGAAAGAGAGGGAAACTCTGAATAAG
CATGGACCTACAGGAGGTGAACTAAATGAAATGATTGCCAAAGCAAAGATTTCTGGAAGC
AGTACAGGCGTTAATCATATGTTTGAAAGCACAGAAACCATTGCACCTGGTGATATTTTC
TTTTCTCAGGATTATGCAGCCTTGACTATGCAGCAGATTACTGAAAACAAATCCAATAAA
AAGACTCAGGTACTGACTGATAGGAATGTTGTACTATCTGTGAAAACACCTGCCAATTTT
AATAATCAGAGTAGCAGAAGGAATTTATCGAGTAATACTATGACTCGACCAACTATGAGC
GCGAGCTCTTCAGTAAGTAGGCAGAGCAGCACTTTGAGTGAGGCTAGTGGAAGGACAACT
GCAAGTATGAAAAGGTTCACGGCGAACAGGCAAAAGAAGCAATCAGAAGCATGGTTTTCT
TGTCTCAACAAGGGATCTTGTAGAACCTCAAGAAGAGAATCTCCAGAAAGAGGGCGCCCG
ATTGATGAAGCTTTAGTTATTGCCAAGGCATCTATAGTTGAAAGCCTGAGACCCTTTTGG
GCTGATAGGTATCAACCTGTTTCACTAGAAGAATTCACTTGCCACAAGCAAGAAGCTTTA
CTACTTAAAGACCTGGTTTCTTCAAATGAAACCTTTCCACAAATCTTATTCAAGGGACCT
TCTGGCTCTGGGAAGAGAACTCTCGCGATTGCTCTTCTTCATGAAATCTATGGAGATGCA
ATCTGCAATGAAACAAGGCCAGTGCAAGTTGTTGTACCAGTAAGCTCAAGTCCTCACCAT
ATAGAGCTGAACGTTCGATTGGAACCTAATGCTAGATATGCAATAATGGCTTTTGTTAAG
CAAATAAGTAGCGAGTATGCACTGACCCCTGAAATCAGCAGAGTGAATATGAAGGCTGAT
TACAAAGTAATAGTTCTGTATAATGTGGACAAAGCTGCAGAGAACATACAGCACCTAATA
AAATGGATAATGGACTGCTATTCAGATGCTTGCAAACTCATTCTCTGCTGTGAAGATGAT
GTATCCATACTTGACTCAGTGAAAAGCCACACCAAAGTTGTTGAACTATCAGCTCCTGTA
ACTCATGAAATCATGGAAGTTCTTACTCAGATAGCAAGAAAGGAAGATTTTGAACTACCA
ATGGGCTTCGCGGCTAAGATAGCTGCCAAATCAAAGCAAAACCTGAGGAGAGCAATTATG
GCTCTTGAAGCCTGCAAAGCGCACAACTATCCCTTTGCCGAAGACCAACCAATTTCAATA
GGATGGGAAGATATTGTAATAGAACTTGCAGCAGAAATTCTAGCTGATCCCACCACAACG
AGGTTATTCTCTGCGCGGGGAAAGTTTCAAAAACTTCTGGTGGAGTTTGTACATCCAAAA
CTTATTCTCCTGAAACTAGTTGAAGAATTCCTTAAAAGGGTTGATGCTGGTATAATAAGG
GAAATTTATTATTGGCATGCTTATTATGAGAAAAGGCTTCCTCTTGGAACAAGTGCTTTG
TTAAAATTAGAAGAATTTGTGGCAAAATTTATGAGCATTAACAGGAAAAATTTCGGCAAC
CGTCAGCAGTTTCACTAA

Peptide Sequence

PEP ID

XP_016490112.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107809928 [Nicotiana tabacum]
Sequence

MEGASTYKRTLQLKISSSMRQRRSGYEPSDTETDWTLDSPHREANANNEKEIHLEEPESE
EQNLALQKAKDNNFLNVSRRTNVPSPARRRTTKSPYKPRRDTDDDVHSPAKALPRSVSTF
ARRPDLYSRRNVSSFQKSEYHRHTSPYKYEDEFADSNRKQNNVHSRLGEKSNYNRRYASA
PRPDRQHRFDASKERRKADKTLSQLPNRSLSRKERETLNKHGPTGGELNEMIAKAKISGS
STGVNHMFESTETIAPGDIFFSQDYAALTMQQITENKSNKKTQVLTDRNVVLSVKTPANF
NNQSSRRNLSSNTMTRPTMSASSSVSRQSSTLSEASGRTTASMKRFTANRQKKQSEAWFS
CLNKGSCRTSRRESPERGRPIDEALVIAKASIVESLRPFWADRYQPVSLEEFTCHKQEAL
LLKDLVSSNETFPQILFKGPSGSGKRTLAIALLHEIYGDAICNETRPVQVVVPVSSSPHH
IELNVRLEPNARYAIMAFVKQISSEYALTPEISRVNMKADYKVIVLYNVDKAAENIQHLI
KWIMDCYSDACKLILCCEDDVSILDSVKSHTKVVELSAPVTHEIMEVLTQIARKEDFELP
MGFAAKIAAKSKQNLRRAIMALEACKAHNYPFAEDQPISIGWEDIVIELAAEILADPTTT
RLFSARGKFQKLLVEFVHPKLILLKLVEEFLKRVDAGIIREIYYWHAYYEKRLPLGTSAL
LKLEEFVAKFMSINRKNFGNRQQFH

Transcript Sequence

Gene sequence data has not been registered.